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Whitehill AR, Joelsson LMagnus T, Schmidt JA, Wang DT, Johnson MS, Ono S.  2017.  Clumped isotope effects during OH and Cl oxidation of methane. Geochimica et Cosmochimica Acta. 196:307-325.
Wang DT, Reeves EP, McDermott JM, Seewald JS, Ono S.  2018.  Clumped isotopologue constraints on the origin of methane at seafloor hot springs. Geochimica et Cosmochimica Acta. 223:141-158.
Antler G, Turchyn AV, Ono S, Sivan O, Bosak T.  2017.  Combined 34 S, 33 S and 18 O isotope fractionations record different intracellular steps of microbial sulfate reduction. Geochimica et Cosmochimica Acta. 203:364–380.
Goldman MJacob, Vandewiele NM, Ono S, Green WH.  2019.  Computer-generated isotope model achieves experimental accuracy of filiation for position-specific isotope analysis. Chemical Geology. 514:1-9.
Meredith LK, Rao D, Bosak T, Klepac-Ceraj V, Tada KR, Hansel CM, Ono S, Prinn RG.  2014.  Consumption of atmospheric hydrogen during the life cycle of soil-dwelling actinobacteria. Environmental Microbiology Reports. 6:226–238.
Ono S., Whitehill AR, Lyons J.R.  2013.  Contribution of isotopologue self-shielding to sulfur mass-independent fractionation during sulfur dioxide photolysis. Journal of Geophysical Research: AtmospheresJournal of Geophysical Research: Atmospheres. 118(5):2444-2454.
Goldman MJacob, Ono S, Green WH.  2019.  Correct Symmetry Treatment for X + X Reactions Prevents Large Errors in Predicted Isotope Enrichment. The Journal of Physical Chemistry A. 123:2320-2324.
Ono S, Beukes NJ, Rumble D, Fogel ML.  2006.  Early evolution of atmospheric oxygen from multiple-sulfur and carbon isotope records of the 2.9 Ga Mozaan Group of the Pongola Supergroup, Southern Africa. South African Journal of GeologySouth African Journal of Geology. 109(1-2):97-108.
Lopes J.C., de Matos L.F., Harper M.T., Giallongo F., Oh J., Gruen D., Ono S., Kindermann M., Duval S., Hristov A.N..  2016.  Effect of 3-nitrooxipropanol on methane and hydrogen emissions, methane isotopic signature, and ruminal fermentation in dairy cows. Journal of Dairy Science. 99(7):5335-5344.
Sim M.S., Ono S, Donovan K, Templer S.P., Bosak T..  2011.  Effect of electron donors on the fractionation of sulfur isotopes by a marine Desulfovibrio sp.. Geochimica et Cosmochimica ActaGeochimica et Cosmochimica Acta. 75(15):4244-4259.
Sim M.S., Ono S, Bosak T.  2012.  Effects of Iron and Nitrogen Limitation on Sulfur Isotope Fractionation during Microbial Sulfate Reduction.. Applied and environmental microbiologyApplied and environmental microbiology. :AEM.01842-12-.
Sim M.S., Ono S., Bosak T..  2012.  Effects of Iron and Nitrogen Limitation on Sulfur Isotope Fractionation during Microbial Sulfate Reduction. Applied and Environmental Microbiology.
Lever M.a., Rouxel O., Alt J.C, Shimizu N., Ono S., Coggon R.M, Shanks W.C, Lapham L., Elvert M., Prieto-Mollar X. et al..  2013.  Evidence for Microbial Carbon and Sulfur Cycling in Deeply Buried Ridge Flank Basalt. ScienceScience. 339(6125):1305-1308.
Whitehill AR, Ono S.  2012.  Excitation band dependence of sulfur isotope mass-independent fractionation during photochemistry of sulfur dioxide using broadband light sources. Geochimica et Cosmochimica ActaGeochimica et Cosmochimica Acta. 94:238-253.
Fortin M-A, E. Watson B, Stern RA, Ono S.  2019.  Experimental characterization of diffusive and Soret isotopic fractionation of sulfur in a reduced, anhydrous basaltic melt. Chemical Geology. 510:10-17.
Gruen DS, Wang DT, Könneke M, Topçuoğlu BD, Stewart LC, Goldhammer T, Holden JF, Hinrichs K-U, Ono S.  2018.  Experimental investigation on the controls of clumped isotopologue and hydrogen isotope ratios in microbial methane. Geochimica et Cosmochimica Acta. 237:339-356.
Inagaki F., Hinrichs K.-U., Kubo Y., Bowles M.W, Heuer V.B, Hong W.-L., Hoshino T., Ijiri A., Imachi H., Ito M. et al..  2015.  Exploring deep microbial life in coal-bearing sediment down to  2.5 km below the ocean floor. Science. 349:420-424.